Boruto and Sarada sneak out of the village and head to Orochimaru's research lab to find clues about Mitsuki. After evading the ninja guarding the entrance, they get in. But what they observe at the facility and hear from Orochimaru makes Boruto realize that he never truly knew Mitsuki. Meanwhile, the village finds out that Boruto and Sarada have gone in search of Mitsuki, and Shikadai and his Team 10 are assigned a tracking mission to bring back them back.

The ninja assigned to the Hidden Leaf Gate are attacked, and Mitsuki disappears. Boruto and Sarada are unaware of this when their scheduled mission is suddenly canceled. Worried, the two start searching for their teammate. When they learn that all the jonin have been summoned by the Hokage, they set out to find out what's going on.

The first Five Kage Summit since the attack by the Otsutsuki Clan is held in Hidden Leaf. The current Kage as well as their predecessors assemble, except the Third Tsuchikage, Ohnoki. Boruto and Team 7 have been assigned security duty, but Boruto gets bored and lets his guard down. Then by chance, they encounter Ohnoki.

Metal's father, Rock Lee, announces that he will train Metal to master the ultimate taijutsu technique, the Eight Inner Gates. The thought that he cannot fail this training fills Metal with anxiety, and he ends up buying an item that's supposed to calm his nerves. But it doesn't work, and his father ends up postponing the training. He then runs into Might Guy, his father's mentor and a hero of the Fourth Great Ninja War.

The ninja in the gas mask appears again during filming and kidnaps Tomaru. Despite everything that happened, Cho-Cho continues to worry about Tomaru and berates Konohamaru and Moeri for failing to stop the abductor. Meanwhile, Ashina agrees to deliver the money as instructed in the ransom note.

The movie studio where Team 7 and Team 10 have been assigned to is attacked by a mysterious ninja. The lead actress is wounded and Tomaru, the lead actor, picks Cho-Cho to be the stand-in! Tomaru's flirting has Cho-Cho on Cloud 9, but Sarada and the others worry that the lovestruck Cho-Cho has lost her focus on the mission!

Popular actors Tomaru and Ashina receive death threats from an unknown person, so Team 10 is assigned to a joint mission with Team 7 to guard them. The two teams assemble to get the details of their mission, but Boruto sees a beautiful girl he doesn't remember seeing before…

Boruto has made his rounds apologizing to everyone for his transgressions during the exam, but Momoshiki's prophecy continues to bother him.

With Boruto watching intently, Naruto and Sasuke begin their battle against a powered-up Momoshiki! The two heroes summon their spectacular powers once again to corner him, but an unexpected intruder appears and the situation changes drastically!

Sasuke and the Kage wage an intense battle against the ridiculously powerful Momoshiki and Kinshiki of the Otsutsuki Clan. During that time, Boruto and Naruto, who have always been at odds, face each other and connect for the first time. But Momoshiki interrupts their reunion.

Naruto uses all his power to protect everyone from the Otsutsuki Clan. Boruto realizes the magnitude of his father's love for the village and its people and, at the same time, his own weakness. Watching his friends working on repairs and aiding the wounded in the aftermath of the attack, Boruto realizes the meaning of his father's words. Knowing that this experience has matured his student a little, Sasuke brings up a certain mission.

Momoshiki, Kinshiki and Urashiki of the Otsutsuki Clan suddenly appear in the arena filled with spectators. Using his Scientific Ninja Tool, Boruto hurls jutsu after jutsu to no avail against Momoshiki, who is targeting Naruto. Meanwhile, Urashiki is curious about Mitsuki's strange power and goes after him, but he is confronted by Gaara along with the Mizukage Chojuro. Naruto and the other ninja do all they can to protect the citizens, and for the first time, Boruto witnesses the magnitude of his father's power in real combat.

The final battle of the tournament begins with Boruto, Sarada and Shinki participating in a battle royale. As the lone representative remaining from the Hidden Sand, Shinki is determined to preserve the pride of the Sand, and goes on the offensive against Boruto and Sarada. Boruto and Sarada team up to fight Shinki, but he puts up an impenetrable defense. Sarada falls, and Boruto's chakra is nearly exhausted, but he refuses to give up!

Leaving Mitsuki in the care of Yubina, a doctor and friend of Mugino, Boruto and the others go to a black market in the Land of Silence, a dangerous and lawless gathering place for disgraced ninja. Team 7 make it to a shop located in the most dangerous district whose owner knows all the latest news. After a scuffle with the bodyguards, the team finally gets ready to ask the shopkeeper for information.

Boruto and the team finally find the missing researcher. Despite his resistance, the team is determined to take him back safely to their client.

Boruto and Team 7 are tasked with a mission to find a missing researcher of a medical equipment company in a distant nation. Mugino, a jonin who has a keen sense of location, comes on board to guide and assist Team 7. Without wasting any time, Boruto and the team start their mission with Mugino.

Using intel obtained from Shojoji the leader of the Mujina Gang, Sai and Sasuke journey to the Hidden Rain Village to find a location thought to be the hideout of an organization known as "Kara, the Husk."

Cho-Cho and Choji go to the sweet shop after their training session, only to be disappointed that they are unusually out of azuki bean sweets. After hearing thieves have been raiding the deliveries, Cho-Cho plans to team up with Anko Mitarashi, her friend in desserts and beloved Ninja Academy instructor, to protect the azuki beans that she loves, and capture the bandits!

One rainy night, guided by Mikazuki the cat, Mitsuki rescues an injured man. Mysteriously, Mikazuki seems to take a liking to the man who says he’s come to visit his sister who works in the Leaf Village. Soon after, Team 7 is assigned to back up the Leaf Police Force on a security mission. Their client is a president of a company who is being targeted by a serial killer known as "The Rainy Day Killer."

Himawari attends the Ninja Academy's trial session where participants get a taste of ninja training. Himawari’s already decided to become a ninja, which annoys Norimaki and Edo, who criticize her for being there just for fun. Things become uncomfortable when they're assigned to the same team.